PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang10g05100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 170aa    MW: 18485.6 Da    PI: 10.4692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang10g05100.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-203483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  Vang10g05100.1 34 QYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFPTAEAAALAYDEAALRFKG 83
                    7********.**********94....45***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-333392IPR001471AP2/ERF domain
CDDcd000181.40E-213392No hitNo description
PROSITE profilePS5103225.1323491IPR001471AP2/ERF domain
SMARTSM003804.9E-383497IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-223492IPR016177DNA-binding domain
PfamPF008474.6E-143483IPR001471AP2/ERF domain
PRINTSPR003671.8E-113546IPR001471AP2/ERF domain
PRINTSPR003671.8E-115773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
LPEDPTTLSH STAVQNNSNE PSHPPQHQGS ARKQYRGVRQ RPWGKWAAEI RDPKKAARVW  60
LGTFPTAEAA ALAYDEAALR FKGSKAKLNF PEKVHLSGEL GYLTNRPPSL QASSTPFQLL  120
PRHTPTDNDA ILSSSSSPSS STFSMNSAAS SSEPPTKRKP DFDAKQKLH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-273399470ATERF1
2gcc_A2e-273399470ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014506869.15e-94PREDICTED: ethylene-responsive transcription factor ERF114-like
SwissprotQ9FH543e-40EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLA0A0L9TIR32e-93A0A0L9TIR3_PHAAN; Uncharacterized protein
STRINGVIT_17s0000g00200.t011e-40(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-30ERF family protein